Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816520.1_cds_XP_016498843.1_12820
CDS Infomation

[gene=LOC107817506] [db_xref=GeneID:107817506] [protein=pentatricopeptide repeat-containing protein At5g08510-like] [protein_id=XP_016498843.1] [location=join(3691..4617,4724..5323)] [gbkey=CDS]
Sequence

ATGAACCAGCTGAAACAAATACACGCCCACACTCTCCGAAATGGCACCGACTTCACCCAA
TTCTTGATTACCAAGCTTGTTGAAATCCCAAACATACCGTATGCCCACAAAGTGTTCGAC
AATATTACCAGACCAACTGTCTTTCTCTACAACAAGCTCATTCAAGCCTATTCTTCTCAT
GGCCTTCCCAGCCAGTGTTTTTCTCTCTATATCCATATGCGCCGGCAAGGCTGCTCCCCT
AATCCACACTCCTTCACTTTCCTCTTCGCCGCATCCACCAGCCGTTCCATCCCCATACAA
GGCCAAATGTTCCATGTCCATTTCATCAAATGGGGTTTCAATTTCGACATCTACGCTTTA
ACTGCACTTGTTGACATGTATGCTAAAATGGGCCTGTTGCCTTCTGCGCGAAAGCTCTTC
GACGAGATGGAAATGAAGGATGTGCCCACTTGGAATTCTTTGATTGCAGGGTATACCAAG
AATGGGAATGTGGAAGAAGCTTTCAAGTTGTTTTCAGCAATGCCTTCAAGGAATGTGATT
TCCTGGACAGCAATGATTTCAGGCTATTCGCAAAATGGCAAGTATGCGAATGCATTAACT
GTCTACAAGGAAATGGAGAAAGACAAAGGAGTAAAGCCTAATGAAGTCACAATTGCTAGT
GTGCTTCCAGCTTGTGCGAATCTTGGGGCGTTGGAGGTTGGGCAGAAAATTGAAGCTAAT
GCAAGGGCAAATGGATACTTTAAGAATATGTTTGTCTGCAATGCTGTGCTTGAAATGTAT
ATGAAATGTGGTAGAATTGATAGGGCAATGCAACTCTTTCACGAGATTGGTAGGAGGAGG
AACTTGTGTTCTTGGAATACCATGATCATGGGGTTAGCTGTCCATGGAAAAGGTGATGAA
GCTCTTACGTTTTTCAACCAAATGCTAGGAGAAGGAAATGCACCTGATGATGTAACGTTT
GTAGGAGCAATCTTAGCATGCACACATGGAGGCATGGTAGCAAAGGGCTGGGGACTCCTC
AGCTTGATGGAGCAAAGATTCTCCATAGTTCCAAAGTTGGAACACTATGGCTGTATGGTT
GATCTCTTAGGCCGGGCTGGAAAGTTGCAGGAAGCTTATGATCTTATAGAGAGCATGCCA
ATGACACCTGATTCGGTTATATGGGGAACTCTGCTTGGAGCCTGCAGCTTCCATGGCAAT
GTTGAACTGGCTGAGAAAGCAGCCGAGTTCCTTTCTGTGTTGGAGCCGTGGAATCCCGGA
AATTATGTTATTCTCTCAAACATCTATGCAAGAGCTGGCCGATGGGATGGTGTTGCAAGG
TTAAGGAAACTGATGAAGTCCTCCCAGATTACAAAAGCAGCAGGGTACAGCTTCATTGAG
GAGGGAGGTGATATTCATAAGTTCATAGTAGAGGATAAATCCCACCAAAAATCAAAAGAG
ATATATGCATTGCTTGATTTAGTCACGACTATATTAAAGTTTGATGAAAGCACCATTGAT
ATTGATTTGGATTCTATTGTCGAATAA

Peptide Sequence

PEP ID

XP_016498843.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g08510-like [Nicotiana tabacum]
Sequence

MNQLKQIHAHTLRNGTDFTQFLITKLVEIPNIPYAHKVFDNITRPTVFLYNKLIQAYSSH
GLPSQCFSLYIHMRRQGCSPNPHSFTFLFAASTSRSIPIQGQMFHVHFIKWGFNFDIYAL
TALVDMYAKMGLLPSARKLFDEMEMKDVPTWNSLIAGYTKNGNVEEAFKLFSAMPSRNVI
SWTAMISGYSQNGKYANALTVYKEMEKDKGVKPNEVTIASVLPACANLGALEVGQKIEAN
ARANGYFKNMFVCNAVLEMYMKCGRIDRAMQLFHEIGRRRNLCSWNTMIMGLAVHGKGDE
ALTFFNQMLGEGNAPDDVTFVGAILACTHGGMVAKGWGLLSLMEQRFSIVPKLEHYGCMV
DLLGRAGKLQEAYDLIESMPMTPDSVIWGTLLGACSFHGNVELAEKAAEFLSVLEPWNPG
NYVILSNIYARAGRWDGVARLRKLMKSSQITKAAGYSFIEEGGDIHKFIVEDKSHQKSKE
IYALLDLVTTILKFDESTIDIDLDSIVE

Transcript Sequence

Gene sequence data has not been registered.